ManipulateAggregates
0.1
ManipulateAggregates
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Index
Index
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A
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B
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C
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D
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E
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F
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G
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H
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I
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L
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M
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O
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P
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R
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S
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T
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U
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V
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W
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X
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Y
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Z
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__internal__ (ManipulateAggregates.aggregate.agg attribute)
A
agg (class in ManipulateAggregates.aggregate)
align() (ManipulateAggregates.aggregate.agg method)
append() (ManipulateAggregates.aggregate.agg method)
apply_func_density() (in module ManipulateAggregates.orbitalcharacter)
B
border (ManipulateAggregates.collection.gnuplot.gnuplot.gp_dict attribute)
C
cleave() (ManipulateAggregates.aggregate.agg method)
color (ManipulateAggregates.collection.gnuplot.gnuplot.gp_dict attribute)
correct_mark (ManipulateAggregates.collection.gnuplot.gnuplot attribute)
correct_mark_dist (ManipulateAggregates.collection.gnuplot.gnuplot attribute)
cp (ManipulateAggregates.aggregate.agg attribute)
D
dash (ManipulateAggregates.collection.gnuplot.gnuplot.gp_dict attribute)
data_to_file() (ManipulateAggregates.collection.gnuplot.gnuplot method)
default_cp (ManipulateAggregates.aggregate.agg attribute)
DEFAULT_FUNC() (in module ManipulateAggregates.orbitalcharacter)
default_vs (ManipulateAggregates.aggregate.agg attribute)
density_overlap() (in module ManipulateAggregates.orbitalcharacter)
dict (ManipulateAggregates.collection.gnuplot.gnuplot attribute)
difference_density() (in module ManipulateAggregates.orbitalcharacter)
dimensions (ManipulateAggregates.collection.gnuplot.gnuplot attribute)
DrawGLSpheres() (in module ManipulateAggregates.collection.opengl)
DrawGLTrimesh() (in module ManipulateAggregates.collection.opengl)
dummy_ff (class in ManipulateAggregates.aggregate)
duplicate() (ManipulateAggregates.aggregate.agg method)
E
emptyplot() (ManipulateAggregates.collection.gnuplot.gnuplot method)
Energy() (ManipulateAggregates.aggregate.dummy_ff method)
expand_total_wavefunction() (in module ManipulateAggregates.orbitalcharacter)
F
f (ManipulateAggregates.collection.gnuplot.gnuplot attribute)
ff (ManipulateAggregates.aggregate.agg attribute)
filename (ManipulateAggregates.collection.gnuplot.gnuplot.gp_dict attribute)
FiletypeException
finalize() (ManipulateAggregates.collection.gnuplot.gnuplot method)
font (ManipulateAggregates.collection.gnuplot.gnuplot attribute)
fontsize (ManipulateAggregates.collection.gnuplot.gnuplot attribute)
function (ManipulateAggregates.collection.gnuplot.gnuplot.gp_dict attribute)
G
get_align_matrix() (ManipulateAggregates.aggregate.agg method)
get_angle() (ManipulateAggregates.aggregate.agg method)
get_bond_map() (ManipulateAggregates.aggregate.agg method)
get_bondlength() (ManipulateAggregates.aggregate.agg method)
get_center() (ManipulateAggregates.aggregate.agg method)
get_charges() (ManipulateAggregates.aggregate.agg method)
get_colours() (ManipulateAggregates.aggregate.agg method)
get_coordinates() (ManipulateAggregates.aggregate.agg method)
get_cp() (ManipulateAggregates.aggregate.agg method)
get_data_dir() (in module ManipulateAggregates)
get_density() (ManipulateAggregates.aggregate.agg method)
get_dihedral() (ManipulateAggregates.aggregate.agg method)
get_dipole_moment() (ManipulateAggregates.aggregate.agg method)
get_energy() (ManipulateAggregates.aggregate.agg method)
get_iso_surface() (ManipulateAggregates.aggregate.agg method)
get_main_axes() (ManipulateAggregates.aggregate.agg method)
get_masses() (ManipulateAggregates.aggregate.agg method)
get_names() (ManipulateAggregates.aggregate.agg method)
get_obatom_vec() (ManipulateAggregates.aggregate.agg method)
get_partial_charges() (ManipulateAggregates.aggregate.agg method)
get_pointgroup() (ManipulateAggregates.aggregate.agg method)
get_potential() (ManipulateAggregates.aggregate.agg method)
get_povlight_matrix() (ManipulateAggregates.aggregate.agg method)
get_surface() (ManipulateAggregates.aggregate.agg method)
get_vdw_radii() (ManipulateAggregates.aggregate.agg method)
get_vdw_surface() (ManipulateAggregates.aggregate.agg method)
get_vs() (ManipulateAggregates.aggregate.agg method)
GetCameraMatrix() (in module ManipulateAggregates.collection.opengl)
GetCoordinates() (ManipulateAggregates.aggregate.dummy_ff method)
GetUnit() (ManipulateAggregates.aggregate.dummy_ff method)
GLAdjustCamera() (in module ManipulateAggregates.collection.opengl)
GLMainDisplay() (in module ManipulateAggregates.collection.opengl)
glue() (ManipulateAggregates.aggregate.agg method)
gnuplot (class in ManipulateAggregates.collection.gnuplot)
gnuplot.gp_dict (class in ManipulateAggregates.collection.gnuplot)
GP (ManipulateAggregates.collection.gnuplot.gnuplot attribute)
guess_format() (in module ManipulateAggregates.aggregate)
H
head (ManipulateAggregates.collection.gnuplot.gnuplot.gp_dict attribute)
I
info (ManipulateAggregates.aggregate.agg attribute)
InitGL() (in module ManipulateAggregates.collection.opengl)
L
lineplot() (ManipulateAggregates.collection.gnuplot.gnuplot method)
lines (ManipulateAggregates.collection.gnuplot.gnuplot.gp_dict attribute)
linewidth (ManipulateAggregates.collection.gnuplot.gnuplot.gp_dict attribute)
M
ManipulateAggregates (module)
ManipulateAggregates.aggregate (module)
ManipulateAggregates.collection (module)
ManipulateAggregates.collection.gnuplot (module)
ManipulateAggregates.collection.opengl (module)
ManipulateAggregates.energyscan (module)
ManipulateAggregates.orbitalcharacter (module)
ManipulateMoleculesError
mark() (ManipulateAggregates.collection.gnuplot.gnuplot method)
mirror() (ManipulateAggregates.aggregate.agg method)
MissingModuleError
move_closer() (ManipulateAggregates.aggregate.agg method)
O
obmol (ManipulateAggregates.aggregate.agg attribute)
opacity (ManipulateAggregates.collection.gnuplot.gnuplot.gp_dict attribute)
OpenBabelError
optimize() (ManipulateAggregates.aggregate.agg method)
P
part() (ManipulateAggregates.aggregate.agg method)
part_aggregate() (ManipulateAggregates.aggregate.agg method)
point (ManipulateAggregates.collection.gnuplot.gnuplot.gp_dict attribute)
points (ManipulateAggregates.collection.gnuplot.gnuplot.gp_dict attribute)
pointsize (ManipulateAggregates.collection.gnuplot.gnuplot.gp_dict attribute)
postplot() (ManipulateAggregates.collection.gnuplot.gnuplot method)
povray() (in module ManipulateAggregates.collection.opengl)
R
read_from_file() (in module ManipulateAggregates.aggregate)
read_molden_orbitals_corrected() (in module ManipulateAggregates.orbitalcharacter)
rectanglecount (ManipulateAggregates.collection.gnuplot.gnuplot attribute)
rmsd() (ManipulateAggregates.aggregate.agg method)
rotate() (ManipulateAggregates.aggregate.agg method)
rotate_main() (ManipulateAggregates.aggregate.agg method)
S
set() (ManipulateAggregates.collection.gnuplot.gnuplot method)
set_angle() (ManipulateAggregates.aggregate.agg method)
set_background() (ManipulateAggregates.collection.gnuplot.gnuplot method)
set_bondlength() (ManipulateAggregates.aggregate.agg method)
set_cp() (ManipulateAggregates.aggregate.agg method)
set_dihedral() (ManipulateAggregates.aggregate.agg method)
set_ecp() (ManipulateAggregates.aggregate.agg method)
set_label() (ManipulateAggregates.collection.gnuplot.gnuplot method)
set_stick() (ManipulateAggregates.collection.gnuplot.gnuplot method)
set_title() (ManipulateAggregates.collection.gnuplot.gnuplot method)
set_vs() (ManipulateAggregates.aggregate.agg method)
set_xrange() (ManipulateAggregates.collection.gnuplot.gnuplot method)
set_yrange() (ManipulateAggregates.collection.gnuplot.gnuplot method)
set_zrange() (ManipulateAggregates.collection.gnuplot.gnuplot method)
Setup() (ManipulateAggregates.aggregate.dummy_ff method)
snap() (in module ManipulateAggregates.collection.opengl)
solid (ManipulateAggregates.collection.gnuplot.gnuplot.gp_dict attribute)
SteepestDescent() (ManipulateAggregates.aggregate.dummy_ff method)
T
tag_parts() (ManipulateAggregates.aggregate.agg method)
tempfiles (ManipulateAggregates.collection.gnuplot.gnuplot attribute)
title (ManipulateAggregates.collection.gnuplot.gnuplot.gp_dict attribute)
translate() (ManipulateAggregates.aggregate.agg method)
type (ManipulateAggregates.collection.gnuplot.gnuplot.gp_dict attribute)
U
unset() (ManipulateAggregates.collection.gnuplot.gnuplot method)
V
vdw_check() (ManipulateAggregates.aggregate.agg method)
visualize() (ManipulateAggregates.aggregate.agg method)
vs (ManipulateAggregates.aggregate.agg attribute)
W
write() (ManipulateAggregates.aggregate.agg method)
WritePovrayTrimesh() (in module ManipulateAggregates.collection.opengl)
X
xcol (ManipulateAggregates.collection.gnuplot.gnuplot.gp_dict attribute)
xmarks (ManipulateAggregates.collection.gnuplot.gnuplot attribute)
xrange (ManipulateAggregates.collection.gnuplot.gnuplot attribute)
Y
ycol (ManipulateAggregates.collection.gnuplot.gnuplot.gp_dict attribute)
yield_values() (in module ManipulateAggregates.collection.opengl)
ymarks (ManipulateAggregates.collection.gnuplot.gnuplot attribute)
yrange (ManipulateAggregates.collection.gnuplot.gnuplot attribute)
Z
zcol (ManipulateAggregates.collection.gnuplot.gnuplot.gp_dict attribute)
zrange (ManipulateAggregates.collection.gnuplot.gnuplot attribute)